ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P49721_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P49721_F1_nD1

P49721_F1_nD1

UID: 003550470

AlphaFold

Range: 1-195
AlphaFold: AF-P49721
UniProt: P49721 (all domains)
Gene: PSMB2

Protein: Proteasome subunit beta type-2 (Macropain subunit C7-I) (Multicatalytic endopeptidase complex subunit C7-I) (Proteasome component C7-I) (Proteasome subunit beta-4) (beta-4)

3D Structure

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Related Domains

Browse other domains in Proteasome →

Classification

AArchitecturea+b four layers(a.13)

XX-groupNtn/PP2C(210)

HH-groupNtn(210.1)

TT-groupProteasome subunits(210.1.1)

FFamilyProteasome(210.1.1.1)

Ligands

in contact, ≤ 4 Å

(3AR,6R,6AS)-6-((S)-((S)-CYCLOHEX-2-ENYL)(HYDROXY)METHYL)-6A-METHYL-4-OXO-HEXAHYDRO-2H-FURO[3,2-C]PYRROLE-6-CARBALDEHYDE
drugDrugBank DB08515within 5 Å only
DB08889
drugDrugBank DB08889within 5 Å only

Pfam Families

PF00227Proteasome

Proteasome subunit

ClanCL0052NTN

External Links

AlphaFold DB: P49721 UniProt: P49721

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-195

Shown in the structure viewer. Drug annotations from DrugDomain.