ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P47989_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/P47989_F1_nD5

P47989_F1_nD5

UID: 003550816

AlphaFold

Range: 696-1333
AlphaFold: AF-P47989
UniProt: P47989 (all domains)
Gene: XDH

Protein: Xanthine dehydrogenase/oxidase [Includes: Xanthine dehydrogenase (XD) (EC 1.17.1.4); Xanthine oxidase (XO) (EC 1.17.3.2) (Xanthine oxidoreductase) (XOR)]

3D Structure

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Related Domains

Browse other domains in MoCoBD_1, MoCoBD_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupMocoBD/DmpA-related(231)

HH-groupMocoBD/DmpA-related(231.1)

TT-groupMolybdenum cofactor-binding domain(231.1.1)

FFamilyMoCoBD_1, MoCoBD_2(231.1.1.3)

Ligands

in contact, ≤ 4 Å

DB00437
drugDrugBank DB00437within 5 Å only
DB00583
drugDrugBank DB00583within 5 Å only
Topiroxostat

Pfam Families

PF02738MoCoBD_1

Molybdopterin cofactor-binding domain

ClanCL0635DmpA_ArgJ

PF20256MoCoBD_2

Molybdopterin cofactor-binding domain

ClanCL0635DmpA_ArgJ

External Links

AlphaFold DB: P47989 UniProt: P47989

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 696-1333

drugDrugBank DB01685within 5 Å only

Dioxo(sulfanyl)molybdenum

drugDrugBank DB03328within 5 Å only

Eniluracil

drugDrugBank DB03516within 5 Å only

Niraxostat

drugDrugBank DB03841within 5 Å only

Febuxostat

drugDrugBank DB04854within 5 Å only

Oxypurinol

drugDrugBank DB05262within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.