ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P13639_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P13639_F1_nD2

P13639_F1_nD2

UID: 003550977

AlphaFold

Range: 361-495
AlphaFold: AF-P13639
UniProt: P13639 (all domains)
Gene: EEF2

Protein: Elongation factor 2 (EF-2) (EC 3.6.5.-)

3D Structure

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Related Domains

Browse other domains in GTP_EFTU_D2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAlanine racemase-C(1.1.7)

FFamilyGTP_EFTU_D2(1.1.7.19)

Ligands

in contact, ≤ 4 Å

Adenosine-5-Diphosphoribose
drugDrugBank DB02059within 5 Å only
DB03223
drugDrugBank DB03223within 5 Å only
Guanosine-5'-Diphosphate

Pfam Families

PF03144GTP_EFTU_D2

Elongation factor Tu domain 2

ClanCL0866ALR_C-like

External Links

AlphaFold DB: P13639 UniProt: P13639

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 361-495

drugDrugBank DB04315within 5 Å only

N~2~,N~2~-DIMETHYL-N~1~-(6-OXO-5,6-DIHYDROPHENANTHRIDIN-2-YL)GLYCINAMIDE

drugDrugBank DB08348within 5 Å only

Esketamine

drugDrugBank DB11823within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.