ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P30405_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P30405_F1_nD1

P30405_F1_nD1

UID: 003550985

AlphaFold

Range: 46-205
AlphaFold: AF-P30405
UniProt: P30405 (all domains)
Gene: PPIF

Protein: Peptidyl-prolyl cis-trans isomerase F, mitochondrial (PPIase F) (EC 5.2.1.8) (Cyclophilin D) (CyP-D) (CypD) (Cyclophilin F) (Mitochondrial cyclophilin) (CyP-M) (Rotamase F)

3D Structure

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Related Domains

Browse other domains in Pro_isomerase →

Classification

AArchitecturebeta barrels(a.1)

XX-groupCyclophilin-like(75)

HH-groupCyclophilin-like(75.1)

TT-groupCyclophilin-like(75.1.1)

FFamilyPro_isomerase(75.1.1.1)

Ligands

in contact, ≤ 4 Å

DB00091
drugDrugBank DB00091within 5 Å only
Proline
drugDrugBank DB00172within 5 Å only
Triglyme

Pfam Families

PF00160Pro_isomerase

Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD

ClanCL0475Cyclophil-like

External Links

AlphaFold DB: P30405 UniProt: P30405

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 46-205

drugDrugBank DB02078within 5 Å only

Coumarin 120

drugDrugBank DB08168within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.