ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P13639_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/P13639_F1_nD4

P13639_F1_nD4

UID: 003551003

AlphaFold

Range: 581-740
AlphaFold: AF-P13639
UniProt: P13639 (all domains)
Gene: EEF2

Protein: Elongation factor 2 (EF-2) (EC 3.6.5.-)

3D Structure

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Related Domains

Browse other domains in EFG_IV →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein S5 domain 2-like(212)

HH-groupRibosomal protein S5 domain 2-like(212.1)

TT-groupRibosomal protein S5 domain 2-like(212.1.1)

FFamilyEFG_IV(212.1.1.17)

Ligands

in contact, ≤ 4 Å

Adenosine-5-Diphosphoribose
drugDrugBank DB02059within 5 Å only
DB03223
drugDrugBank DB03223within 5 Å only
N~2~,N~2~-DIMETHYL-N~1~-(6-OXO-5,6-DIHYDROPHENANTHRIDIN-2-YL)GLYCINAMIDE

Pfam Families

Elongation factor G, domain IV

ClanCL0329S5

External Links

AlphaFold DB: P13639 UniProt: P13639

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 581-740

drugDrugBank DB08348within 5 Å only

Esketamine

drugDrugBank DB11823within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.