ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P00558_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P00558_F1_nD1

P00558_F1_nD1

UID: 003551022

AlphaFold

Range: 6-190
AlphaFold: AF-P00558
UniProt: P00558 (all domains)
Gene: PGK1

Protein: Phosphoglycerate kinase 1 (EC 2.7.11.1) (EC 2.7.2.3) (Cell migration-inducing gene 10 protein) (Primer recognition protein 2) (PRP 2)

3D Structure

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Related Domains

Browse other domains in PGK →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphoglycerate kinase domain 1(7532)

HH-groupPhosphoglycerate kinase domain 1(7532.1)

TT-groupPhosphoglycerate kinase domain 1(7532.1.1)

FFamilyPGK(7532.1.1.1)

Ligands

in contact, ≤ 4 Å

DB09130
drugDrugBank DB09130within 5 Å only
DB11638
drugDrugBank DB11638within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Phosphoglycerate kinase

External Links

AlphaFold DB: P00558 UniProt: P00558

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-190