ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O60547_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O60547_F1_nD1

O60547_F1_nD1

UID: 003551605

AlphaFold

Range: 6-370
AlphaFold: AF-O60547
UniProt: O60547 (all domains)
Gene: GMDS

Protein: GDP-mannose 4,6 dehydratase (EC 4.2.1.47) (GDP-D-mannose dehydratase) (GMD)

3D Structure

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Related Domains

Browse other domains in GDP_Man_Dehyd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyGDP_Man_Dehyd(2003.1.1.72)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-Diphosphate-Rhamnose
drugDrugBank DB02547within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF16363GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: O60547 UniProt: O60547

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 6-370