ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P04746_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P04746_F1_nD2

P04746_F1_nD2

UID: 003552016

AlphaFold

Range: 416-510
AlphaFold: AF-P04746
UniProt: P04746 (all domains)
Gene: AMY2A

Protein: Pancreatic alpha-amylase (PA) (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)

3D Structure

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Related Domains

Browse other domains in Alpha-amylase_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupGlycosyl hydrolase domain-like(12)

HH-groupGlycosyl hydrolase domain(12.1)

TT-groupGlycosyl hydrolase domain(12.1.1)

FFamilyAlpha-amylase_C(12.1.1.3)

Ligands

in contact, ≤ 4 Å

DB00284
drugDrugBank DB00284within 5 Å only
N-[4-hydroxymethyl-cyclohexan-6-yl-1,2,3-triol]-4,6-dideoxy-4-aminoglucopyranoside
drugDrugBank DB02218within 5 Å only

Pfam Families

PF02806Alpha-amylase_C

Alpha amylase, C-terminal all-beta domain

ClanCL0369GHD

External Links

AlphaFold DB: P04746 UniProt: P04746

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 416-510

DB02889

drugDrugBank DB02889within 5 Å only

4,6-dideoxy-4-amino-alpha-D-glucose

drugDrugBank DB03439within 5 Å only

DB03495

drugDrugBank DB03495within 5 Å only

alpha-D-quinovopyranose

drugDrugBank DB03773within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.