ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P02743_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P02743_F1_nD1

P02743_F1_nD1

UID: 003552740

AlphaFold

Range: 21-223
AlphaFold: AF-P02743
UniProt: P02743 (all domains)
Gene: APCS

Protein: Serum amyloid P-component (SAP) (9.5S alpha-1-glycoprotein) [Cleaved into: Serum amyloid P-component(1-203)]

3D Structure

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Related Domains

Browse other domains in Pentaxin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyPentaxin(10.1.1.5)

Ligands

in contact, ≤ 4 Å

DB01593
drugDrugBank DB01593within 5 Å only
DB09130
drugDrugBank DB09130within 5 Å only
DB14487

Pfam Families

PF00354Pentaxin

Pentaxin family

ClanCL0004Concanavalin

External Links

AlphaFold DB: P02743 UniProt: P02743

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 21-223

drugDrugBank DB14487within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.