ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P26358_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/P26358_F1_nD3

P26358_F1_nD3

UID: 003553497

AlphaFold

Range: 501-615
AlphaFold: AF-P26358
UniProt: P26358 (all domains)
Gene: DNMT1

Protein: DNA (cytosine-5)-methyltransferase 1 (Dnmt1) (EC 2.1.1.37) (CXXC-type zinc finger protein 9) (DNA methyltransferase HsaI) (DNA MTase HsaI) (M.HsaI) (MCMT)

3D Structure

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Related Domains

Browse other domains in DNMT1-RFD →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupReplication foci-targeting sequence C-terminal domain(101.33)

TT-groupReplication foci-targeting sequence C-terminal domain(101.33.1)

FFamilyDNMT1-RFD(101.33.1.1)

Ligands

in contact, ≤ 4 Å

DB00721
drugDrugBank DB00721within 5 Å only
Azacitidine
drugDrugBank DB00928within 5 Å only
DB01035

Pfam Families

PF12047DNMT1-RFD

Cytosine specific DNA methyltransferase replication foci domain

External Links

AlphaFold DB: P26358 UniProt: P26358

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 501-615

drugDrugBank DB01035within 5 Å only

Flucytosine

drugDrugBank DB01099within 5 Å only

DB01262

drugDrugBank DB01262within 5 Å only

DB05668

drugDrugBank DB05668within 5 Å only

Epigallocatechin gallate

drugDrugBank DB12116within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.