ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P99999_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P99999_F1_nD1

P99999_F1_nD1

UID: 003553512

AlphaFold

Range: 1-105
AlphaFold: AF-P99999
UniProt: P99999 (all domains)
Gene: CYCS

Protein: Cytochrome c

3D Structure

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Related Domains

Browse other domains in Cytochrom_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupCytochrome c-like(107)

HH-groupCytochrome c(107.1)

TT-groupCytochrome c(107.1.1)

FFamilyCytochrom_C(107.1.1.1)

Ligands

in contact, ≤ 4 Å

Minocycline
drugDrugBank DB01017within 5 Å only
Protoporphyrin Ix Containing Co
drugDrugBank DB02110within 5 Å only
Imidazole

Pfam Families

PF00034Cytochrom_C

Cytochrome c

ClanCL0318Cytochrome-c

External Links

AlphaFold DB: P99999 UniProt: P99999

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-105

drugDrugBank DB03366within 5 Å only

Zinc protoporphyrin

drugDrugBank DB03934within 5 Å only

Trimethyllysine

drugDrugBank DB03977within 5 Å only

DB04249

drugDrugBank DB04249within 5 Å only

DB11638

drugDrugBank DB11638within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.