ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O15143_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O15143_F1_nD1

O15143_F1_nD1

UID: 003554314

AlphaFold

Range: 1-290,311-370
AlphaFold: AF-O15143
UniProt: O15143 (all domains)
Gene: ARPC1B

Protein: Actin-related protein 2/3 complex subunit 1B (Arp2/3 complex 41 kDa subunit) (p41-ARC)

3D Structure

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Related Domains

Browse other domains in WD40 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyWD40(5.1.4.1)

Ligands

in contact, ≤ 4 Å

N-[2-(2-methyl-1H-indol-3-yl)ethyl]thiophene-2-carboxamide
drugDrugBank DB08235within 5 Å only
(2S)-2-(3-bromophenyl)-3-(5-chloro-2-hydroxyphenyl)-1,3-thiazolidin-4-one
drugDrugBank DB08236within 5 Å only

Pfam Families

WD domain, G-beta repeat

ClanCL0186Beta_propeller

External Links

AlphaFold DB: O15143 UniProt: O15143

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-290,311-370

Shown in the structure viewer. Drug annotations from DrugDomain.