ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O00206_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O00206_F1_nD1

O00206_F1_nD1

UID: 003554765

AlphaFold

Range: 31-660
AlphaFold: AF-O00206
UniProt: O00206 (all domains)
Gene: TLR4

Protein: Toll-like receptor 4 (hToll) (CD antigen CD284)

3D Structure

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Related Domains

Browse other domains in LRR_1, LRR_4, LRR_6, LRR_8 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupLeucine-rich repeats(207.1)

TT-groupLeucine-rich repeats(207.1.1)

FFamilyLRR_1, LRR_4, LRR_6, LRR_8(207.1.1.142)

Ligands

in contact, ≤ 4 Å

DB00924
drugDrugBank DB00924within 5 Å only
DB01183
drugDrugBank DB01183within 5 Å only
Lauric acid

Pfam Families

Leucine Rich Repeat

ClanCL0022LRR

Leucine Rich repeats (2 copies)

ClanCL0022LRR

Leucine Rich repeat

ClanCL0022LRR

Leucine rich repeat

ClanCL0022LRR

External Links

AlphaFold DB: O00206 UniProt: O00206

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 31-660

drugDrugBank DB03017within 5 Å only

DB05475

drugDrugBank DB05475within 5 Å only

DB06447

drugDrugBank DB06447within 5 Å only

DB13615

drugDrugBank DB13615within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.