ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P38606_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P38606_F1_nD2

P38606_F1_nD2

UID: 003555287

AlphaFold

Range: 126-205
AlphaFold: AF-P38606
UniProt: P38606 (all domains)
Gene: ATP6V1A

Protein: V-type proton ATPase catalytic subunit A (V-ATPase subunit A) (EC 7.1.2.2) (V-ATPase 69 kDa subunit) (Vacuolar ATPase isoform VA68) (Vacuolar proton pump subunit alpha)

3D Structure

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Related Domains

Browse other domains in ATP-synt_ab_Xtn →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325)

HH-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325.1)

TT-groupSingle hybrid motif(325.1.7)

FFamilyATP-synt_ab_Xtn(325.1.7.12)

Ligands

in contact, ≤ 4 Å

Alendronic acid
drugDrugBank DB00630within 5 Å only
Etidronic acid
drugDrugBank DB01077within 5 Å only
DB06733

Pfam Families

PF16886ATP-synt_ab_Xtn

ATPsynthase alpha/beta subunit barrel-sandwich domain

ClanCL0105Hybrid

External Links

AlphaFold DB: P38606 UniProt: P38606

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 126-205

drugDrugBank DB06733within 5 Å only

DB06734

drugDrugBank DB06734within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.