ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P08253_F1_nD6 - ECOD Domain | ECOD

ECOD/Domains/P08253_F1_nD6

P08253_F1_nD6

UID: 003555528

AlphaFold

Range: 466-660
AlphaFold: AF-P08253
UniProt: P08253 (all domains)
Gene: MMP2

Protein: 72 kDa type IV collagenase (EC 3.4.24.24) (72 kDa gelatinase) (Gelatinase A) (Matrix metalloproteinase-2) (MMP-2) (TBE-1) [Cleaved into: PEX]

3D Structure

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Related Domains

Browse other domains in Hemopexin →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group4-bladed(5.1.1)

FFamilyHemopexin(5.1.1.1)

Ligands

in contact, ≤ 4 Å

Marimastat
drugDrugBank DB00786within 5 Å only
Captopril
drugDrugBank DB01197within 5 Å only
Halofuginone

Pfam Families

PF00045Hemopexin

Hemopexin

External Links

AlphaFold DB: P08253 UniProt: P08253

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 466-660

drugDrugBank DB04866within 5 Å only

DB12843

drugDrugBank DB12843within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.