ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P48728_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P48728_F1_nD2

P48728_F1_nD2

UID: 003555540

AlphaFold

Range: 316-400
AlphaFold: AF-P48728
UniProt: P48728 (all domains)
Gene: AMT

Protein: Aminomethyltransferase, mitochondrial (EC 2.1.2.10) (Glycine cleavage system T protein) (GCVT)

3D Structure

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Related Domains

Browse other domains in GCV_T_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAminomethyltransferase beta-barrel domain(1.1.8)

FFamilyGCV_T_C(1.1.8.3)

Ligands

in contact, ≤ 4 Å

DB00116
drugDrugBank DB00116within 5 Å only
NADH
drugDrugBank DB00157within 5 Å only
DB04789

Pfam Families

PF08669GCV_T_C

Glycine cleavage T-protein C-terminal barrel domain

ClanCL0740GCV_T_C

External Links

AlphaFold DB: P48728 UniProt: P48728

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 316-400

drugDrugBank DB04789within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.