ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q00987_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q00987_F1_nD1

Q00987_F1_nD1

UID: 003556853

AlphaFold

Range: 21-115
AlphaFold: AF-Q00987
UniProt: Q00987 (all domains)
Gene: MDM2

Protein: E3 ubiquitin-protein ligase Mdm2 (EC 2.3.2.27) (Double minute 2 protein) (Hdm2) (Oncoprotein Mdm2) (RING-type E3 ubiquitin transferase Mdm2) (p53-binding protein Mdm2)

3D Structure

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Related Domains

Browse other domains in SWIB →

Classification

AArchitecturealpha arrays(a.6)

XX-groupSWIB/MDM2 domain(178)

HH-groupSWIB/MDM2 domain(178.1)

TT-groupSWIB/MDM2 domain(178.1.1)

FFamilySWIB(178.1.1.1)

Ligands

in contact, ≤ 4 Å

DB01593
drugDrugBank DB01593within 5 Å only
Cis-[4,5-Bis-(4-Chlorophenyl)-2-(2-Isopropoxy-4-Methoxyphenyl)-4,5-Dihyd Roimidazol-1-Yl]-Piperazin-1-Yl-Methanone
drugDrugBank DB04144within 5 Å only

Pfam Families

SWIB/MDM2 domain

ClanCL0906SWIB

External Links

AlphaFold DB: Q00987 UniProt: Q00987

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 21-115

DB14487

drugDrugBank DB14487within 5 Å only

DB14533

drugDrugBank DB14533within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.