ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P00338_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P00338_F1_nD1

P00338_F1_nD1

UID: 003557822

AlphaFold

Range: 6-160
AlphaFold: AF-P00338
UniProt: P00338 (all domains)
Gene: LDHA

Protein: L-lactate dehydrogenase A chain (LDH-A) (EC 1.1.1.27) (Cell proliferation-inducing gene 19 protein) (LDH muscle subunit) (LDH-M) (Renal carcinoma antigen NY-REN-59)

3D Structure

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Related Domains

Browse other domains in Ldh_1_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyLdh_1_N(2003.1.1.2)

Ligands

in contact, ≤ 4 Å

Etheno-NAD
drugDrugBank DB02483within 5 Å only
Nicotinamide
drugDrugBank DB02701within 5 Å only
DB09118

Pfam Families

PF00056Ldh_1_N

lactate/malate dehydrogenase, NAD binding domain

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: P00338 UniProt: P00338

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-160

drugDrugBank DB09118within 5 Å only

DB09130

drugDrugBank DB09130within 5 Å only

DB11638

drugDrugBank DB11638within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.