ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

P00734_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/P00734_F1_nD3

P00734_F1_nD3

UID: 003557978

AlphaFold

Range: 211-295
AlphaFold: AF-P00734
UniProt: P00734 (all domains)
Gene: F2

Protein: Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]

3D Structure

Loading viewer...

Related Domains

Browse other domains in Kringle →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupKringle-like(380)

HH-groupKringle-like(380.1)

TT-groupKringle-like(380.1.1)

FFamilyKringle(380.1.1.2)

Ligands

in contact, ≤ 4 Å

DB00006
drugDrugBank DB00006within 5 Å only
Menadione
drugDrugBank DB00170within 5 Å only
DB00278

Pfam Families

PF00051Kringle

Kringle domain

ClanCL0602Kringle

External Links

AlphaFold DB: P00734 UniProt: P00734

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 211-295

drugDrugBank DB00278within 5 Å only

DB01593

drugDrugBank DB01593within 5 Å only

2-{2-hydroxy-[1,1'-biphenyl]-3-yl}-1H-1,3-benzodiazole-5-carboximidamide

drugDrugBank DB01725within 5 Å only

Beta-(2-Naphthyl)-Alanine

drugDrugBank DB01766within 5 Å only

2-(2-hydroxy-phenyl)-3H-benzoimidazole-5-carboxamidine

drugDrugBank DB02287within 5 Å only

DB03847

drugDrugBank DB03847within 5 Å only

Lysophosphotidylserine

drugDrugBank DB04136within 5 Å only

DB04898

drugDrugBank DB04898within 5 Å only

DB05714

drugDrugBank DB05714within 5 Å only

DB06695

drugDrugBank DB06695within 5 Å only

methyl L-phenylalaninate

drugDrugBank DB06838within 5 Å only

DB07016

drugDrugBank DB07016within 5 Å only

DB07353

drugDrugBank DB07353within 5 Å only

5-(DIMETHYLAMINO)-1-NAPHTHALENESULFONIC ACID(DANSYL ACID)

drugDrugBank DB07376within 5 Å only

DB07440

drugDrugBank DB07440within 5 Å only

DB07461

drugDrugBank DB07461within 5 Å only

3-(7-DIAMINOMETHYL-NAPHTHALEN-2-YL)-PROPIONIC ACID ETHYL ESTER

drugDrugBank DB07639within 5 Å only

4-Hydroxyphenylpyruvic acid

drugDrugBank DB07718within 5 Å only

DB07897

drugDrugBank DB07897within 5 Å only

DB07944

drugDrugBank DB07944within 5 Å only

DB08254

drugDrugBank DB08254within 5 Å only

DB08624

drugDrugBank DB08624within 5 Å only

DB09130

drugDrugBank DB09130within 5 Å only

DB09332

drugDrugBank DB09332within 5 Å only

Nafamostat

drugDrugBank DB12598within 5 Å only

DB12831

drugDrugBank DB12831within 5 Å only

DB14487

drugDrugBank DB14487within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.