ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P02647_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P02647_F1_nD1

P02647_F1_nD1

UID: 003558748

AlphaFold

Range: 31-170,211-265
AlphaFold: AF-P02647
UniProt: P02647 (all domains)
Gene: APOA1

Protein: Apolipoprotein A-I (Apo-AI) (ApoA-I) (Apolipoprotein A1) [Cleaved into: Proapolipoprotein A-I (ProapoA-I); Truncated apolipoprotein A-I (Apolipoprotein A-I(1-242))]

3D Structure

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Related Domains

Browse other domains in Apolipoprotein →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFour-helical up-and-down bundle(601)

HH-groupApolipoprotein(601.19)

TT-groupApolipoprotein(601.19.1)

FFamilyApolipoprotein(601.19.1.1)

Ligands

in contact, ≤ 4 Å

DB01593
drugDrugBank DB01593within 5 Å only
DB09130
drugDrugBank DB09130within 5 Å only
DB14487

Pfam Families

PF01442Apolipoprotein

Apolipoprotein A1/A4/E domain

ClanCL0725Apolipoprotein

External Links

AlphaFold DB: P02647 UniProt: P02647

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 31-170,211-265

drugDrugBank DB14487within 5 Å only

DB14533

drugDrugBank DB14533within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.