ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P13073_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P13073_F1_nD1

P13073_F1_nD1

UID: 003558853

AlphaFold

Range: 28-169
AlphaFold: AF-P13073
UniProt: P13073 (all domains)
Gene: COX4I1

Protein: Cytochrome c oxidase subunit 4 isoform 1, mitochondrial (Cytochrome c oxidase polypeptide IV) (Cytochrome c oxidase subunit IV isoform 1) (COX IV-1)

3D Structure

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Related Domains

Browse other domains in COX4 →

Classification

AArchitectureextended segments(a.20)

XX-groupMitochondrial cytochrome c oxidase subunit IV(5003)

HH-groupMitochondrial cytochrome c oxidase subunit IV(5003.1)

TT-groupMitochondrial cytochrome c oxidase subunit IV(5003.1.1)

FFamilyCOX4(5003.1.1.1)

Ligands

in contact, ≤ 4 Å

Cholic Acid
drugDrugBank DB02659within 5 Å only
N-Formylmethionine
drugDrugBank DB04464within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Cytochrome c oxidase subunit IV

External Links

AlphaFold DB: P13073 UniProt: P13073

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 28-169