ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q96DM1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q96DM1_F1_nD1

Q96DM1_F1_nD1

UID: 003561766

AlphaFold

Range: 86-125,151-165,191-495
AlphaFold: AF-Q96DM1
UniProt: Q96DM1 (all domains)
Gene: PGBD4

Protein: PiggyBac transposable element-derived protein 4

3D Structure

Loading viewer...

Related Domains

Browse other domains in DDE_Tnp_1_7 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyDDE_Tnp_1_7(2484.1.1.145)

Pfam Families

PF13843DDE_Tnp_1_7

Transposase IS4

ClanCL0219RNase_H

External Links

AlphaFold DB: Q96DM1 UniProt: Q96DM1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 86-125,151-165,191-495