ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q96JS3_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q96JS3_F1_nD2

Q96JS3_F1_nD2

UID: 003563481

AlphaFold

Range: 416-465,496-795
AlphaFold: AF-Q96JS3
UniProt: Q96JS3 (all domains)
Gene: PGBD1

Protein: PiggyBac transposable element-derived protein 1 (Cerebral protein 4)

3D Structure

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Related Domains

Browse other domains in DDE_Tnp_1_7 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyDDE_Tnp_1_7(2484.1.1.145)

Pfam Families

PF13843DDE_Tnp_1_7

Transposase IS4

ClanCL0219RNase_H

External Links

AlphaFold DB: Q96JS3 UniProt: Q96JS3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 416-465,496-795