ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q08289_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q08289_F1_nD1

Q08289_F1_nD1

UID: 003570703

AlphaFold

Range: 86-195,266-275
AlphaFold: AF-Q08289
UniProt: Q08289 (all domains)
Gene: CACNB2

Protein: Voltage-dependent L-type calcium channel subunit beta-2 (CAB2) (Calcium channel voltage-dependent subunit beta 2) (Lambert-Eaton myasthenic syndrome antigen B) (MYSB)

3D Structure

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Related Domains

Browse other domains in VGCC_beta4Aa_N →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyVGCC_beta4Aa_N(4.1.1.77)

Ligands

in contact, ≤ 4 Å

DB00270
drugDrugBank DB00270within 5 Å only
DB00393
drugDrugBank DB00393within 5 Å only
DB00401

Pfam Families

PF12052VGCC_beta4Aa_N

Voltage gated calcium channel subunit beta domain 4Aa N terminal

External Links

AlphaFold DB: Q08289 UniProt: Q08289

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 86-195,266-275

drugDrugBank DB00401within 5 Å only

DB00622

drugDrugBank DB00622within 5 Å only

DB01023

drugDrugBank DB01023within 5 Å only

DB01054

drugDrugBank DB01054within 5 Å only

Nifedipine

drugDrugBank DB01115within 5 Å only

Mibefradil

drugDrugBank DB01388within 5 Å only

DB04855

drugDrugBank DB04855within 5 Å only

DB06712

drugDrugBank DB06712within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.