ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3fqdB1 - ECOD Domain | ECOD

ECOD/Domains/e3fqdB1

e3fqdB1

UID: 000357086

PDB

Range: B:1-352
PDB: 3FQD chain B(all domains)
UniProt: O13836 (all domains)
Gene: din1

Molecule: Protein din1

3D Structure

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Related Domains

Browse other domains in RAI1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyRAI1(2008.1.1.27)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

RAI1 like PD-(D/E)XK nuclease

ClanCL0236PDDEXK

External Links

ECOD PDB View: 3FQD RCSB PDB: 3FQD PDBe: 3FQD UniProt: O13836

Downloads

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