ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P20393_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P20393_F1_nD2

P20393_F1_nD2

UID: 003570928

AlphaFold

Range: 266-310,426-610
AlphaFold: AF-P20393
UniProt: P20393 (all domains)
Gene: NR1D1

Protein: Nuclear receptor subfamily 1 group D member 1 (Rev-erbA-alpha) (V-erbA-related protein 1) (EAR-1)

3D Structure

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Related Domains

Browse other domains in Hormone_recep →

Classification

AArchitecturealpha arrays(a.6)

XX-groupNuclear receptor ligand-binding domain(188)

HH-groupNuclear receptor ligand-binding domain(188.1)

TT-groupNuclear receptor ligand-binding domain(188.1.1)

FFamilyHormone_recep(188.1.1.1)

Ligands

in contact, ≤ 4 Å

DB14013
drugDrugBank DB14013within 5 Å only
DB14014
drugDrugBank DB14014within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00104Hormone_recep

Ligand-binding domain of nuclear hormone receptor

External Links

AlphaFold DB: P20393 UniProt: P20393

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 266-310,426-610