ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P23560_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P23560_F1_nD1

P23560_F1_nD1

UID: 003571336

AlphaFold

Range: 136-245
AlphaFold: AF-P23560
UniProt: P23560 (all domains)
Gene: BDNF

Protein: Neurotrophic factor BDNF precursor form (proBDNF) (Abrineurin) (Brain-derived neurotrophic factor) [Cleaved into: Neurotrophic factor BDNF]

3D Structure

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Related Domains

Browse other domains in NGF →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupCystine-knot cytokines(385)

HH-groupCystine-knot cytokines(385.1)

TT-groupCystine-knot cytokines(385.1.1)

FFamilyNGF(385.1.1.4)

Ligands

in contact, ≤ 4 Å

DB05047
drugDrugBank DB05047within 5 Å only
DB09130
drugDrugBank DB09130within 5 Å only
Esketamine

Pfam Families

Nerve growth factor family

ClanCL0079Cystine-knot

External Links

AlphaFold DB: P23560 UniProt: P23560

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 136-245

drugDrugBank DB11823within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.