ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9NSD5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9NSD5_F1_nD1

Q9NSD5_F1_nD1

UID: 003572306

AlphaFold

Range: 31-160,181-580
AlphaFold: AF-Q9NSD5
UniProt: Q9NSD5 (all domains)
Gene: SLC6A13

Protein: Sodium- and chloride-dependent GABA transporter 2 (GAT-2) (Solute carrier family 6 member 13)

3D Structure

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Related Domains

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Classification

AArchitecturealpha complex topology(a.10)

XX-groupSodium:neurotransmitter symporter family (SNF)-like(5051)

HH-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1)

TT-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1.1)

FFamilySNF(5051.1.1.1)

Ligands

in contact, ≤ 4 Å

DB08848
drugDrugBank DB08848within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Sodium:neurotransmitter symporter family

ClanCL0062APC

External Links

AlphaFold DB: Q9NSD5 UniProt: Q9NSD5

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 31-160,181-580