ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vx9A1 - ECOD Domain | ECOD

ECOD/Domains/e2vx9A1

e2vx9A1

UID: 000357803

PDB

Range: A:2-64
PDB: 2VX9 chain A(all domains)
UniProt: B0R5M0 (all domains)
Gene: OE_3073R

Molecule: DODECIN

3D Structure

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Related Domains

Browse other domains in Dodecin →

Classification

AArchitecturea+b two layers(a.11)

XX-groupDodecin subunit-like(872)

HH-groupFlavin-binding protein dodecin-like(872.1)

TT-groupFlavin-binding protein dodecin-like(872.1.1)

FFamilyDodecin(872.1.1.2)

Ligands

in contact, ≤ 4 Å

RiboflavinRBF
drugDrugBank DB00140
Chloride ionCL
Sodium ionNA
metal

Pfam Families

PF07311Dodecin

Dodecin

ClanCL0319SHS2

External Links

ECOD PDB View: 2VX9 RCSB PDB: 2VX9 PDBe: 2VX9 UniProt: B0R5M0

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.