ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2w8bB1 - ECOD Domain | ECOD

ECOD/Domains/e2w8bB1

e2w8bB1

UID: 000357845

PDB

Range: B:162-430
PDB: 2W8B chain B(all domains)
UniProt: P0A855 (all domains)
Gene: tolB

Molecule: PROTEIN TOLB

3D Structure

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Related Domains

Browse other domains in DPPIV_N, PD40 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group6-bladed(5.1.3)

FFamilyDPPIV_N, PD40(5.1.3.136)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Acetate, Glycerin, Sulfate ion)

AcetateACT
DrugBank DB14511
GlycerinGOL
DrugBank DB09462
Sulfate ion

Pfam Families

PF00930DPPIV_N

Dipeptidyl peptidase IV (DPP IV) N-terminal region

ClanCL0186Beta_propeller

TolB beta propeller domain

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 2W8B RCSB PDB: 2W8B PDBe: 2W8B UniProt: P0A855

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.