ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2w8bD2 - ECOD Domain | ECOD

ECOD/Domains/e2w8bD2

e2w8bD2

UID: 000357848

PDB

Range: D:22-161
PDB: 2W8B chain D(all domains)
UniProt: P0A855 (all domains)
Gene: tolB

Molecule: PROTEIN TOLB

3D Structure

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Related Domains

Browse other domains in TolB_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupTolB, N-terminal domain(7503)

HH-groupTolB, N-terminal domain(7503.1)

TT-groupTolB, N-terminal domain(7503.1.1)

FFamilyTolB_N(7503.1.1.3)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Acetate, Sulfate ion, Glycerol)

AcetateACT
DrugBank DB14511
Sulfate ionSO4
DrugBank DB14546
Glycerol

Pfam Families

TolB amino-terminal domain

ClanCL0342TolB_N

External Links

ECOD PDB View: 2W8B RCSB PDB: 2W8B PDBe: 2W8B UniProt: P0A855

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.