ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3fj5B1 - ECOD Domain | ECOD

ECOD/Domains/e3fj5B1

e3fj5B1

UID: 000358473

PDB

Range: B:84-140
PDB: 3FJ5 chain B(all domains)
UniProt: P00523 (all domains)
Gene: SRC

Molecule: Proto-oncogene tyrosine-protein kinase Src

3D Structure

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Related Domains

Browse other domains in SH3_1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilySH3_1(4.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 5 additives (Acetate, Glycerin, Triethylene glycol, …)

AcetateACT
DrugBank DB14511
GlycerinGOL
DrugBank DB09462
Triethylene glycol

Pfam Families

SH3 domain

ClanCL0010SH3

External Links

ECOD PDB View: 3FJ5 RCSB PDB: 3FJ5 PDBe: 3FJ5 UniProt: P00523

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB02327

Sulfate ionSO4

DrugBank DB14546

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.