ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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G5CKR6_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/G5CKR6_F1_nD1

G5CKR6_F1_nD1

UID: 003587332

AlphaFold

Range: 16-300
AlphaFold: AF-G5CKR6
UniProt: G5CKR6 (all domains)
Gene: tnpA

Protein: Transposase (ISEfm1 transposase) (TnpA)

3D Structure

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Related Domains

Browse other domains in DDE_Tnp_1 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyDDE_Tnp_1(2484.1.1.18)

Pfam Families

PF01609DDE_Tnp_1

Transposase DDE domain

ClanCL0219RNase_H

External Links

AlphaFold DB: G5CKR6 UniProt: G5CKR6

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-300