ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A132P101_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A132P101_F1_nD1

A0A132P101_F1_nD1

UID: 003588764

AlphaFold

Range: 6-125
AlphaFold: AF-A0A132P101
UniProt: A0A132P101 (all domains)
Gene: repB_2

Protein: Initiator RepB protein (Plasmid replication initiation protein)

3D Structure

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Related Domains

Browse other domains in Rep3_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyRep3_N(101.1.2.16)

Pfam Families

Initiator Replication protein, WH1

ClanCL0123HTH

External Links

AlphaFold DB: A0A132P101 UniProt: A0A132P101

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-125