ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A133CT34_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A133CT34_F1_nD2

A0A133CT34_F1_nD2

UID: 003589924

AlphaFold

Range: 141-260,336-355
AlphaFold: AF-A0A133CT34
UniProt: A0A133CT34 (all domains)
Gene: B1P95_03105

Protein: ABC transporter substrate-binding protein (Spermidine/putrescine-binding periplasmic protein PotD)

3D Structure

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Related Domains

Browse other domains in SBP_bac_6 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_6(7523.1.1.26)

Pfam Families

PF13343SBP_bac_6

Bacterial extracellular solute-binding protein

ClanCL0177PBP

External Links

AlphaFold DB: A0A133CT34 UniProt: A0A133CT34

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 141-260,336-355