ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1odaA1 - ECOD Domain | ECOD

ECOD/Domains/e1odaA1

e1odaA1

UID: 000035920

PDB

Range: A:1-118
PDB: 1ODA chain A(all domains)
UniProt: Q62230 (all domains)
Gene: Siglec1

Molecule: SIALOADHESIN

3D Structure

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Related Domains

Browse other domains in V-set →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyV-set(11.1.1.99)

Ligands

in contact, ≤ 4 Å

ME-A-9-N-(BIPHENYL-4-CARBONYL)-AMINO-9-DEOXY-NEU5ACBDU

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Immunoglobulin V-set domain

ClanCL0159E-set

External Links

ECOD PDB View: 1ODA RCSB PDB: 1ODA PDBe: 1ODA UniProt: Q62230

Downloads

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