ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A4I5K9_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A4I5K9_F1_nD3

A4I5K9_F1_nD3

UID: 003592223

AlphaFold

Range: 521-580
AlphaFold: AF-A4I5K9
UniProt: A4I5K9 (all domains)
Gene: LINJ_30_1820

Protein: Putative splicing factor 3a

3D Structure

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Related Domains

Browse other domains in SF3a60_Prp9_C →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupbeta-beta-alpha zinc fingers(386)

HH-groupbeta-beta-alpha zinc fingers(386.1)

TT-groupbeta-beta-alpha zinc fingers(386.1.1)

FFamilySF3a60_Prp9_C(386.1.1.215)

Pfam Families

PF11931SF3a60_Prp9_C

SF3a60/Prp9 C-terminal

ClanCL0361C2H2-zf

External Links

AlphaFold DB: A4I5K9 UniProt: A4I5K9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 521-580