ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A4I0J4_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A4I0J4_F1_nD2

A4I0J4_F1_nD2

UID: 003592235

AlphaFold

Range: 86-105,196-515
AlphaFold: AF-A4I0J4
UniProt: A4I0J4 (all domains)
Gene: LINJ_23_1610

Protein: tRNA carboxymethyluridine synthase (EC 2.3.1.311)

3D Structure

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Related Domains

Browse other domains in Radical_SAM_C →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRadical_SAM_C(2002.1.1.452)

Pfam Families

PF16199Radical_SAM_C

Radical_SAM C-terminal domain

External Links

AlphaFold DB: A4I0J4 UniProt: A4I0J4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 86-105,196-515