ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A4I3P1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A4I3P1_F1_nD1

A4I3P1_F1_nD1

UID: 003593159

AlphaFold

Range: 61-185,431-470
AlphaFold: AF-A4I3P1
UniProt: A4I3P1 (all domains)
Gene: LINJ_28_1750

Protein: TRUD domain-containing protein

3D Structure

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Related Domains

Browse other domains in TruD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPseudouridine synthase(304.102)

TT-groupPseudouridine synthase(304.102.1)

FFamilyTruD(304.102.1.2)

Pfam Families

tRNA pseudouridine synthase D (TruD)

ClanCL0649PseudoU_synth

External Links

AlphaFold DB: A4I3P1 UniProt: A4I3P1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 61-185,431-470