ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3gf6B1 - ECOD Domain | ECOD

ECOD/Domains/e3gf6B1

e3gf6B1

UID: 000359332

PDB

Range: B:24-241
PDB: 3GF6 chain B(all domains)
UniProt: Q8A8D4 (all domains)
Gene: BT_1233

Molecule: uncharacterized bacterial lipoprotein

3D Structure

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Related Domains

Browse other domains in DUF3845 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupTNF-like(10.3)

TT-groupTNF-like(10.3.1)

FFamilyDUF3845(10.3.1.5)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF12956DUF3845

Domain of Unknown Function with PDB structure

ClanCL0100C1q_TNF

External Links

ECOD PDB View: 3GF6 RCSB PDB: 3GF6 PDBe: 3GF6 UniProt: Q8A8D4

Downloads

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