ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3gdpB1 - ECOD Domain | ECOD

ECOD/Domains/e3gdpB1

e3gdpB1

UID: 000359725

PDB

Range: B:294-463
PDB: 3GDP chain B(all domains)
UniProt: Q945K2 (all domains)
Gene: MDL2

Molecule: R-oxynitrile lyase isoenzyme 1

3D Structure

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Related Domains

Browse other domains in GMC_oxred_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupFAD-linked reductases-C(244.1)

TT-groupFAD-linked reductases-C(244.1.1)

FFamilyGMC_oxred_C(244.1.1.9)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
N-AcetylglucosamineNAG
drugDrugBank DB00141

Pfam Families

PF05199GMC_oxred_C

GMC oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3GDP RCSB PDB: 3GDP PDBe: 3GDP UniProt: Q945K2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

N-acetyl-alpha-D-glucosamine

drugDrugBank DB03740

Shown in the structure viewer. Drug annotations from DrugDomain.