ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1nu9C1 - ECOD Domain | ECOD

ECOD/Domains/e1nu9C1

e1nu9C1

UID: 000003600

RepresentativePDB

Range: C:1-145
PDB: 1NU9 chain C(all domains)
UniProt: Q846V4 (all domains)

Molecule: Staphylocoagulase

3D Structure

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Related Domains

Browse other domains in Coagulase →

Classification

AArchitecturealpha bundles(a.7)

XX-groupimmunoglobulin/albumin-binding domain-like(632)

HH-groupStaphylocoagulase(632.5)

TT-groupStaphylocoagulase(632.5.1)

FFamilyCoagulase(632.5.1.1)

Ligands

in contact, ≤ 4 Å

MERCURY (II) IONHG
metal
N-(sulfanylacetyl)-D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide0ZJ
within 5 Å only

+ 1 additive (Imidazole)

Pfam Families

PF08764Coagulase

Staphylococcus aureus coagulase

External Links

ECOD PDB View: 1NU9 RCSB PDB: 1NU9 PDBe: 1NU9 UniProt: Q846V4

Downloads

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ImidazoleIMD

Shown in the structure viewer. Drug annotations from DrugDomain.