ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1gvnA1 - ECOD Domain | ECOD

ECOD/Domains/e1gvnA1

e1gvnA1

UID: 000003602

RepresentativePDB

Range: A:3-90
PDB: 1GVN chain A(all domains)
UniProt: Q57231 (all domains)

Molecule: EPSILON

3D Structure

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Related Domains

Browse other domains in Epsilon_antitox →

Classification

AArchitecturealpha bundles(a.7)

XX-groupimmunoglobulin/albumin-binding domain-like(632)

HH-groupPlasmid maintenance system epsilon/zeta, antidote epsilon subunit(632.6)

TT-groupPlasmid maintenance system epsilon/zeta, antidote epsilon subunit(632.6.1)

FFamilyEpsilon_antitox(632.6.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08998Epsilon_antitox

Bacterial epsilon antitoxin

External Links

ECOD PDB View: 1GVN RCSB PDB: 1GVN PDBe: 1GVN UniProt: Q57231

Downloads

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