ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vtfB2 - ECOD Domain | ECOD

ECOD/Domains/e2vtfB2

e2vtfB2

UID: 000360239

PDB

Range: B:531-619
PDB: 2VTF chain B(all domains)
UniProt: Q9ZB22 (all domains)

Molecule: ENDO-BETA-N-ACETYLGLUCOSAMINIDASE

3D Structure

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Related Domains

Browse other domains in GH85_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyGH85_C(11.1.1.330)

Ligands

in contact, ≤ 4 Å

2-[3-(2-Hydroxy-1,1-Dihydroxymethyl-Ethylamino)-Propylamino]-2-Hydroxymethyl-Propane-1,3-DiolB3P
drugDrugBank DB02676within 5 Å only

+ 1 additive (Triethylene glycol)

Triethylene glycolPGE

Pfam Families

GH85 endohexosaminidases, C-terminal domain

ClanCL0159E-set

External Links

ECOD PDB View: 2VTF RCSB PDB: 2VTF PDBe: 2VTF UniProt: Q9ZB22

Downloads

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DrugBank DB02327

Shown in the structure viewer. Drug annotations from DrugDomain.