ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vtfB3 - ECOD Domain | ECOD

ECOD/Domains/e2vtfB3

e2vtfB3

UID: 000360240

PDB

Range: B:2-351
PDB: 2VTF chain B(all domains)
UniProt: Q9ZB22 (all domains)

Molecule: ENDO-BETA-N-ACETYLGLUCOSAMINIDASE

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_85 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_85(2002.1.1.114)

Ligands

in contact, ≤ 4 Å

2-[3-(2-Hydroxy-1,1-Dihydroxymethyl-Ethylamino)-Propylamino]-2-Hydroxymethyl-Propane-1,3-DiolB3P
drugDrugBank DB02676

+ 1 additive (Triethylene glycol)

Triethylene glycolPGE

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03644Glyco_hydro_85

Glycosyl hydrolase family 85

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 2VTF RCSB PDB: 2VTF PDBe: 2VTF UniProt: Q9ZB22

Downloads

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