ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ex6B1 - ECOD Domain | ECOD

ECOD/Domains/e3ex6B1

e3ex6B1

UID: 000360421

PDB

Range: B:223-479
PDB: 3EX6 chain B(all domains)
UniProt: P11172 (all domains)
Gene: UMPS

Molecule: Orotidine-5'-phosphate decarboxylase

3D Structure

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Related Domains

Browse other domains in OMPdecase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyOMPdecase(2002.1.1.9)

Ligands

in contact, ≤ 4 Å

Uridine monophosphateU5P
drugDrugBank DB03685
Chloride ionCL
within 5 Å only

+ 1 additive (Sulfate ion)

Pfam Families

PF00215OMPdecase

Orotidine 5'-phosphate decarboxylase / HUMPS family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3EX6 RCSB PDB: 3EX6 PDBe: 3EX6 UniProt: P11172

Downloads

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Sulfate ion

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.