ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2zkuB2 - ECOD Domain | ECOD

ECOD/Domains/e2zkuB2

e2zkuB2

UID: 000360687

PDB

Range: B:1-352
PDB: 2ZKU chain B(all domains)
UniProt: P26663 (all domains)

Molecule: Genome polyprotein

3D Structure

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Related Domains

Browse other domains in RdRP_3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRdRP_3(304.48.1.15)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Acetic acid, Glycerin)

Acetic acidACY
DrugBank DB03166
GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Viral RNA dependent RNA polymerase

ClanCL0027RdRP

External Links

ECOD PDB View: 2ZKU RCSB PDB: 2ZKU PDBe: 2ZKU UniProt: P26663

Downloads

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