ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q38EM9_F1_nD6 - ECOD Domain | ECOD

ECOD/Domains/Q38EM9_F1_nD6

Q38EM9_F1_nD6

UID: 003613554

AlphaFold

Range: 611-715,776-815,851-860,951-1220,1246-1279
AlphaFold: AF-Q38EM9
UniProt: Q38EM9 (all domains)
Gene: Tb09.160.5220

Protein: RNA pseudouridylate synthase protein, putative (EC 4.2.1.70)

3D Structure

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Related Domains

Browse other domains in PseudoU_synth_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPseudouridine synthase(304.102)

TT-groupPseudouridine synthase(304.102.1)

FFamilyPseudoU_synth_2(304.102.1.1)

Pfam Families

PF00849PseudoU_synth_2

RNA pseudouridylate synthase

ClanCL0649PseudoU_synth

External Links

AlphaFold DB: Q38EM9 UniProt: Q38EM9

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 611-715,776-815,851-860,951-1220,1246-1279