ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3cqrA1 - ECOD Domain | ECOD

ECOD/Domains/e3cqrA1

e3cqrA1

UID: 000361373

PDB

Range: A:81-251
PDB: 3CQR chain A(all domains)
UniProt: Q39249 (all domains)
Gene: VDE1

Molecule: Violaxanthin de-epoxidase, chloroplast

3D Structure

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Related Domains

Browse other domains in VDE →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupLipocalins(9.1)

TT-groupLipocalins(9.1.1)

FFamilyVDE(9.1.1.10)

Ligands

in contact, ≤ 4 Å

Gadolinium atomGD
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

VDE lipocalin domain

ClanCL0116Calycin

External Links

ECOD PDB View: 3CQR RCSB PDB: 3CQR PDBe: 3CQR UniProt: Q39249

Downloads

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