ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2wcqB2 - ECOD Domain | ECOD

ECOD/Domains/e2wcqB2

e2wcqB2

UID: 000363123

PDB

Range: B:40-85,B:121-146
PDB: 2WCQ chain B(all domains)
UniProt: O25318 (all domains)
Gene: HP_0596

Molecule: TNF-ALPHA INDUCER PROTEIN

3D Structure

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Related Domains

Browse other domains in Tipalpha →

Classification

AArchitecturea+b two layers(a.11)

XX-groupDodecin subunit-like(872)

HH-groupFlavin-binding protein dodecin-like(872.1)

TT-groupFlavin-binding protein dodecin-like(872.1.1)

FFamilyTipalpha(872.1.1.3)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Citric acid)

Citric acidCIT
DrugBank DB04272

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF16753Tipalpha

TNF-alpha-Inducing protein of Helicobacter

ClanCL0319SHS2

External Links

ECOD PDB View: 2WCQ RCSB PDB: 2WCQ PDBe: 2WCQ UniProt: O25318

Downloads

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